Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vma21Q78T54 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vma21Q78T54 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vma21Q78T54 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Vma21Q78T54 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vma21Q78T54 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.6□□□□□ -0.55
Vma21Q78T54 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vma21Q78T54 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.59□□□□□ -0.55
Vma21Q78T54 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.59□□□□□ -0.55
Vma21Q78T54 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vma21Q78T54 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Vma21Q78T54 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Vma21Q78T54 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vma21Q78T54 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.58□□□□□ -0.55
Vma21Q78T54 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vma21Q78T54 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Gm13597-201ENSMUST00000121239 375 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Gm8584-201ENSMUST00000171982 758 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.58□□□□□ -0.56
Vma21Q78T54 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 Gm10819-201ENSMUST00000099988 561 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.58□□□□□ -0.56
Vma21Q78T54 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vma21Q78T54 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Vma21Q78T54 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms