Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm14452-201ENSMUST00000118680 1632 ntBASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm45453-201ENSMUST00000211758 853 ntBASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm27528-202ENSMUST00000222916 2012 ntBASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm9797-201ENSMUST00000052902 613 ntBASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC4.84□□□□□ -1.64
Syne1Q6ZWR6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm8062-201ENSMUST00000139696 444 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm42693-201ENSMUST00000196779 631 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm12341-201ENSMUST00000119724 503 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 AC139580.1-202ENSMUST00000223574 928 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm43697-201ENSMUST00000199637 2581 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm6222-201ENSMUST00000120787 396 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms