Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gm10060-201ENSMUST00000212002 111 ntBASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf4Q6PFF0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf4Q6PFF0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Scaf4Q6PFF0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scaf4Q6PFF0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms