Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf220Q6PDX6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Gm15358-201ENSMUST00000119249 520 ntBASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.49□□□□□ -0.25
Rnf220Q6PDX6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf220Q6PDX6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Gm8097-201ENSMUST00000117903 829 ntBASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms