Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcc2Q6PDG5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Gm6415-201ENSMUST00000118488 348 ntBASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 AA543401-201ENSMUST00000164248 1269 ntBASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcc2Q6PDG5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Smarcc2Q6PDG5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarcc2Q6PDG5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm8410-201ENSMUST00000117225 605 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm12882-201ENSMUST00000121696 517 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm29310-201ENSMUST00000185468 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21825-201ENSMUST00000185728 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm29109-201ENSMUST00000185895 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21896-201ENSMUST00000186520 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21873-201ENSMUST00000186728 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21794-201ENSMUST00000187056 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21880-201ENSMUST00000187275 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21826-201ENSMUST00000187451 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21198-201ENSMUST00000188393 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21749-201ENSMUST00000189343 696 ntBASIC16.57■□□□□ 0.24
Smarcc2Q6PDG5 Gm21901-201ENSMUST00000189568 696 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms