Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd3Q6P9Z1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd3Q6P9Z1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm18733-201ENSMUST00000173950 856 ntBASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm5177-201ENSMUST00000183092 997 ntBASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm45098-201ENSMUST00000207179 657 ntBASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd3Q6P9Z1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms