Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VcanQ62059 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.08□□□□□ -0.31
VcanQ62059 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VcanQ62059 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
VcanQ62059 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
VcanQ62059 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VcanQ62059 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VcanQ62059 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.08□□□□□ -0.31
VcanQ62059 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.08□□□□□ -0.32
VcanQ62059 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Gm13369-201ENSMUST00000119442 987 ntBASIC13.08□□□□□ -0.32
VcanQ62059 Gm11667-201ENSMUST00000119828 486 ntBASIC13.08□□□□□ -0.32
VcanQ62059 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.08□□□□□ -0.32
VcanQ62059 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.08□□□□□ -0.32
VcanQ62059 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
VcanQ62059 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
VcanQ62059 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.08□□□□□ -0.32
VcanQ62059 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.08□□□□□ -0.32
VcanQ62059 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.08□□□□□ -0.32
VcanQ62059 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.08□□□□□ -0.32
VcanQ62059 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.08□□□□□ -0.32
VcanQ62059 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcanQ62059 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Gm25261-201ENSMUST00000157416 134 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
VcanQ62059 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Gm27023-201ENSMUST00000182372 285 ntBASIC13.07□□□□□ -0.32
VcanQ62059 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.07□□□□□ -0.32
VcanQ62059 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.07□□□□□ -0.32
VcanQ62059 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
VcanQ62059 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.07□□□□□ -0.32
VcanQ62059 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VcanQ62059 Gm15370-201ENSMUST00000117158 253 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.07□□□□□ -0.32
VcanQ62059 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.07□□□□□ -0.32
VcanQ62059 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Gm8194-201ENSMUST00000159783 859 ntBASIC13.07□□□□□ -0.32
VcanQ62059 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VcanQ62059 Olfr286-202ENSMUST00000205305 969 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VcanQ62059 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VcanQ62059 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.07□□□□□ -0.32
VcanQ62059 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.07□□□□□ -0.32
VcanQ62059 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VcanQ62059 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcanQ62059 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Gm13464-201ENSMUST00000119418 935 ntBASIC13.06□□□□□ -0.32
VcanQ62059 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.06□□□□□ -0.32
VcanQ62059 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.06□□□□□ -0.32
VcanQ62059 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.06□□□□□ -0.32
VcanQ62059 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.06□□□□□ -0.32
VcanQ62059 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.06□□□□□ -0.32
VcanQ62059 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.06□□□□□ -0.32
VcanQ62059 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.06□□□□□ -0.32
VcanQ62059 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms