Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ccne1Q61457 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.41■□□□□ 0.54
Ccne1Q61457 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ccne1Q61457 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.41■□□□□ 0.54
Ccne1Q61457 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccne1Q61457 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccne1Q61457 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.4■□□□□ 0.54
Ccne1Q61457 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Mir497b-201ENSMUST00000093601 125 ntBASIC18.4■□□□□ 0.54
Ccne1Q61457 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.4■□□□□ 0.54
Ccne1Q61457 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccne1Q61457 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.4■□□□□ 0.54
Ccne1Q61457 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccne1Q61457 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccne1Q61457 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.39■□□□□ 0.54
Ccne1Q61457 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccne1Q61457 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccne1Q61457 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccne1Q61457 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccne1Q61457 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccne1Q61457 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ccne1Q61457 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Gm15429-201ENSMUST00000151268 798 ntBASIC18.39■□□□□ 0.53
Ccne1Q61457 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccne1Q61457 Gm26464-201ENSMUST00000157094 305 ntBASIC18.39■□□□□ 0.53
Ccne1Q61457 Mir1982-201ENSMUST00000157368 74 ntBASIC18.39■□□□□ 0.53
Ccne1Q61457 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.39■□□□□ 0.53
Ccne1Q61457 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.39■□□□□ 0.53
Ccne1Q61457 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccne1Q61457 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.38■□□□□ 0.53
Ccne1Q61457 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.38■□□□□ 0.53
Ccne1Q61457 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccne1Q61457 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Gm17794-201ENSMUST00000220252 955 ntBASIC18.38■□□□□ 0.53
Ccne1Q61457 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccne1Q61457 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.38■□□□□ 0.53
Ccne1Q61457 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms