Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.06■□□□□ 0.32
Mre11Q61216 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mre11Q61216 Gm32390-201ENSMUST00000212713 1172 ntBASIC17.06■□□□□ 0.32
Mre11Q61216 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.06■□□□□ 0.32
Mre11Q61216 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Mre11Q61216 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mre11Q61216 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mre11Q61216 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mre11Q61216 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mre11Q61216 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mre11Q61216 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mre11Q61216 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm37102-201ENSMUST00000195740 1105 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Gm2451-201ENSMUST00000199447 999 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Gm10290-201ENSMUST00000200451 999 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.05■□□□□ 0.32
Mre11Q61216 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Mre11Q61216 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Mre11Q61216 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm44414-201ENSMUST00000203660 2109 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mre11Q61216 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.05■□□□□ 0.32
Mre11Q61216 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mre11Q61216 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Mre11Q61216 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mre11Q61216 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Gm8097-201ENSMUST00000117903 829 ntBASIC17.04■□□□□ 0.32
Mre11Q61216 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.04■□□□□ 0.32
Mre11Q61216 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.04■□□□□ 0.32
Mre11Q61216 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.04■□□□□ 0.32
Mre11Q61216 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.04■□□□□ 0.32
Mre11Q61216 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.04■□□□□ 0.32
Mre11Q61216 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Mre11Q61216 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Mre11Q61216 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mre11Q61216 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mre11Q61216 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.04■□□□□ 0.32
Mre11Q61216 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Mre11Q61216 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Gm18489-201ENSMUST00000172565 551 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms