Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pabpn1lQ5XFR0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.25□□□□□ -0.13
Pabpn1lQ5XFR0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pabpn1lQ5XFR0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Pabpn1lQ5XFR0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pabpn1lQ5XFR0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pabpn1lQ5XFR0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Mzt1-203ENSMUST00000227948 952 ntBASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pabpn1lQ5XFR0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gm27459-201ENSMUST00000184860 107 ntBASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gm28659-201ENSMUST00000188013 759 ntBASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gm43347-201ENSMUST00000200226 580 ntBASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gm44771-201ENSMUST00000206975 626 ntBASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.22□□□□□ -0.13
Pabpn1lQ5XFR0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms