Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm13418-201ENSMUST00000119097 944 ntBASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm18041-201ENSMUST00000218210 618 ntBASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm7284-201ENSMUST00000131667 944 ntBASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms