Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Gm13015-201ENSMUST00000118674 204 ntBASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Gm43474-201ENSMUST00000196415 774 ntBASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf20Q5DTM8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 AA619741-201ENSMUST00000195095 646 ntBASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf20Q5DTM8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm22065-201ENSMUST00000103753 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm22066-201ENSMUST00000103761 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24932-201ENSMUST00000103763 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24115-201ENSMUST00000103799 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm22190-201ENSMUST00000103827 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm22191-201ENSMUST00000103831 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24721-201ENSMUST00000103849 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm28018-201ENSMUST00000103869 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm26399-201ENSMUST00000103937 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm15957-201ENSMUST00000118893 974 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm13823-201ENSMUST00000119930 345 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm25349-201ENSMUST00000177728 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm23616-201ENSMUST00000177797 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm25871-201ENSMUST00000177816 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24752-201ENSMUST00000178240 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24496-201ENSMUST00000178287 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm25649-201ENSMUST00000178476 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm25548-201ENSMUST00000178681 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm23147-201ENSMUST00000178841 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm26095-201ENSMUST00000179270 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm22171-201ENSMUST00000179283 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm23936-201ENSMUST00000179354 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm22619-201ENSMUST00000179516 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm25255-201ENSMUST00000179579 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24755-201ENSMUST00000179691 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm26506-201ENSMUST00000179692 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm25086-201ENSMUST00000179931 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm23243-201ENSMUST00000180047 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24659-201ENSMUST00000180212 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm24169-201ENSMUST00000180244 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm23689-201ENSMUST00000180354 110 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms