Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Urb1Q571H0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Urb1Q571H0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Urb1Q571H0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Urb1Q571H0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Urb1Q571H0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Urb1Q571H0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.08□□□□□ -0.32
Urb1Q571H0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.08□□□□□ -0.32
Urb1Q571H0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Urb1Q571H0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.08□□□□□ -0.32
Urb1Q571H0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.08□□□□□ -0.32
Urb1Q571H0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.08□□□□□ -0.32
Urb1Q571H0 Gm8463-201ENSMUST00000208573 613 ntBASIC13.08□□□□□ -0.32
Urb1Q571H0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Urb1Q571H0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Mir7654-201ENSMUST00000185082 70 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 Gm45841-201ENSMUST00000207700 164 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 BC037039-201ENSMUST00000192003 2205 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.07□□□□□ -0.32
Urb1Q571H0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Urb1Q571H0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Urb1Q571H0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Urb1Q571H0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.06□□□□□ -0.32
Urb1Q571H0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Gm45784-201ENSMUST00000188360 142 ntBASIC13.06□□□□□ -0.32
Urb1Q571H0 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.06□□□□□ -0.32
Urb1Q571H0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.06□□□□□ -0.32
Urb1Q571H0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.06□□□□□ -0.32
Urb1Q571H0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Urb1Q571H0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Urb1Q571H0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms