Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm6630-201ENSMUST00000119199 454 ntBASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm18244-201ENSMUST00000219747 1566 ntBASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm14350-201ENSMUST00000116642 640 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm2231-201ENSMUST00000125661 612 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Prrxl1-205ENSMUST00000228878 723 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm24447-201ENSMUST00000083977 338 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm8242-201ENSMUST00000193029 1420 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm19221-201ENSMUST00000221827 1477 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm13996-201ENSMUST00000118456 430 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm9873-201ENSMUST00000063891 1097 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gm45433-201ENSMUST00000209386 247 ntBASIC8.2□□□□□ -1.1
Herc2Q4U2R1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Herc2Q4U2R1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Gm5597-201ENSMUST00000182353 1193 ntBASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Gm34023-201ENSMUST00000195539 217 ntBASIC8.19□□□□□ -1.1
Herc2Q4U2R1 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Gm44405-201ENSMUST00000198952 126 ntBASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Rn7sk-201ENSMUST00000083103 331 ntBASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Gm26315-201ENSMUST00000083890 321 ntBASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Herc2Q4U2R1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms