Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Syne3Q4FZC9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Gm14701-201ENSMUST00000117156 348 ntBASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Gm43474-201ENSMUST00000196415 774 ntBASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Gm5312-201ENSMUST00000203728 547 ntBASIC15.11■□□□□ 0.01
Syne3Q4FZC9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Syne3Q4FZC9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Syne3Q4FZC9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Gm24158-201ENSMUST00000175263 71 ntBASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Gm8396-201ENSMUST00000057361 823 ntBASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Syne3Q4FZC9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms