Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Gm12490-201ENSMUST00000120255 560 ntBASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Gm45668-201ENSMUST00000211271 493 ntBASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Gm15823-201ENSMUST00000064305 670 ntBASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf38aQ4FK66 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gm37917-201ENSMUST00000194711 392 ntBASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gm18018-201ENSMUST00000198273 408 ntBASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Gm6180-201ENSMUST00000065243 498 ntBASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prpf38aQ4FK66 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Gm23984-201ENSMUST00000157139 203 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Gm5425-201ENSMUST00000214125 459 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Gm18027-201ENSMUST00000218947 619 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prpf38aQ4FK66 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prpf38aQ4FK66 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms