Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Gm44364-201ENSMUST00000198368 141 ntBASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.33■□□□□ 0.36
Shank3Q4ACU6 Gm26315-201ENSMUST00000083890 321 ntBASIC17.33■□□□□ 0.36
Shank3Q4ACU6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shank3Q4ACU6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Gm12241-201ENSMUST00000118330 726 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shank3Q4ACU6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Mir698-201ENSMUST00000102164 109 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm25261-201ENSMUST00000157416 134 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm17376-201ENSMUST00000166016 84 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm10268-201ENSMUST00000085340 555 ntBASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shank3Q4ACU6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms