Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nhlrc4Q3UP44 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Gm27680-201ENSMUST00000184192 160 ntBASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nhlrc4Q3UP44 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm13453-201ENSMUST00000118708 357 ntBASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm15653-201ENSMUST00000119247 907 ntBASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm44344-201ENSMUST00000200287 129 ntBASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm43703-201ENSMUST00000200523 763 ntBASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nhlrc4Q3UP44 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Gm27321-201ENSMUST00000185021 205 ntBASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms