Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Gm25406-201ENSMUST00000157599 105 ntBASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Gm37856-201ENSMUST00000191634 999 ntBASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1brtQ3UNC9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1brtQ3UNC9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms