Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Gm8584-201ENSMUST00000171982 758 ntBASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Brf2Q3UAW9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Brf2Q3UAW9 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Brf2Q3UAW9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms