Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm5587-201ENSMUST00000206270 674 ntBASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccbe1Q3MI99 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccbe1Q3MI99 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccbe1Q3MI99 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccbe1Q3MI99 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccbe1Q3MI99 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccbe1Q3MI99 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccbe1Q3MI99 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccbe1Q3MI99 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms