Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.59□□□□□ -0.39
Chd8Q09XV5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.59□□□□□ -0.39
Chd8Q09XV5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd8Q09XV5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd8Q09XV5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd8Q09XV5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chd8Q09XV5 Prob1-201ENSMUST00000097619 3021 ntBASIC12.58□□□□□ -0.39
Chd8Q09XV5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Chd8Q09XV5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.58□□□□□ -0.4
Chd8Q09XV5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm7541-201ENSMUST00000118361 535 ntBASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm6458-201ENSMUST00000211573 635 ntBASIC12.58□□□□□ -0.4
Chd8Q09XV5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Chd8Q09XV5 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm23153-201ENSMUST00000175323 313 ntBASIC12.57□□□□□ -0.4
Chd8Q09XV5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.57□□□□□ -0.4
Chd8Q09XV5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm5687-201ENSMUST00000118252 640 ntBASIC12.57□□□□□ -0.4
Chd8Q09XV5 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Gm37042-201ENSMUST00000193816 581 ntBASIC12.57□□□□□ -0.4
Chd8Q09XV5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms