Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Tff1Q08423 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tff1Q08423 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.85□□□□□ -0.51
Tff1Q08423 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.85□□□□□ -0.51
Tff1Q08423 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.85□□□□□ -0.51
Tff1Q08423 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.85□□□□□ -0.51
Tff1Q08423 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Gm13597-201ENSMUST00000121239 375 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
Tff1Q08423 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Gm27494-201ENSMUST00000184735 189 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.84□□□□□ -0.51
Tff1Q08423 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tff1Q08423 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.84□□□□□ -0.51
Tff1Q08423 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tff1Q08423 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Tff1Q08423 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tff1Q08423 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tff1Q08423 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tff1Q08423 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Tff1Q08423 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Tff1Q08423 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tff1Q08423 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tff1Q08423 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.83□□□□□ -0.52
Tff1Q08423 Gm13464-201ENSMUST00000119418 935 ntBASIC11.83□□□□□ -0.52
Tff1Q08423 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.83□□□□□ -0.52
Tff1Q08423 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Gm44492-201ENSMUST00000197012 141 ntBASIC11.83□□□□□ -0.52
Tff1Q08423 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.83□□□□□ -0.52
Tff1Q08423 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Tff1Q08423 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Matn2-206ENSMUST00000228570 2798 ntBASIC11.83□□□□□ -0.52
Tff1Q08423 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tff1Q08423 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.83□□□□□ -0.52
Tff1Q08423 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Tff1Q08423 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.82□□□□□ -0.52
Tff1Q08423 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tff1Q08423 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms