Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.42□□□□□ -0.1
Ebf1Q07802 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Gm8749-201ENSMUST00000117737 331 ntBASIC14.42□□□□□ -0.1
Ebf1Q07802 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Gm12138-201ENSMUST00000122180 951 ntBASIC14.42□□□□□ -0.1
Ebf1Q07802 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.42□□□□□ -0.1
Ebf1Q07802 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Gm21854-201ENSMUST00000179901 471 ntBASIC14.42□□□□□ -0.1
Ebf1Q07802 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.42□□□□□ -0.1
Ebf1Q07802 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ebf1Q07802 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.41□□□□□ -0.1
Ebf1Q07802 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.41□□□□□ -0.1
Ebf1Q07802 Gm37917-201ENSMUST00000194711 392 ntBASIC14.41□□□□□ -0.1
Ebf1Q07802 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.41□□□□□ -0.1
Ebf1Q07802 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.41□□□□□ -0.1
Ebf1Q07802 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ebf1Q07802 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ebf1Q07802 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ebf1Q07802 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.41□□□□□ -0.1
Ebf1Q07802 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf1Q07802 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ebf1Q07802 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf1Q07802 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms