Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.31□□□□□ -0.12
Pfdn6Q03958 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.3□□□□□ -0.12
Pfdn6Q03958 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm2810-201ENSMUST00000118681 990 ntBASIC14.3□□□□□ -0.12
Pfdn6Q03958 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm10275-202ENSMUST00000168697 495 ntBASIC14.3□□□□□ -0.12
Pfdn6Q03958 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm27494-201ENSMUST00000184735 189 ntBASIC14.3□□□□□ -0.12
Pfdn6Q03958 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Gm10275-201ENSMUST00000092620 635 ntBASIC14.3□□□□□ -0.12
Pfdn6Q03958 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn6Q03958 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.29□□□□□ -0.12
Pfdn6Q03958 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.29□□□□□ -0.12
Pfdn6Q03958 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Pfdn6Q03958 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.28□□□□□ -0.12
Pfdn6Q03958 Gm2213-201ENSMUST00000197485 688 ntBASIC14.28□□□□□ -0.12
Pfdn6Q03958 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.28□□□□□ -0.12
Pfdn6Q03958 Gm20553-201ENSMUST00000204205 844 ntBASIC14.28□□□□□ -0.12
Pfdn6Q03958 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.28□□□□□ -0.12
Pfdn6Q03958 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.28□□□□□ -0.12
Pfdn6Q03958 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.28□□□□□ -0.12
Pfdn6Q03958 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Pfdn6Q03958 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms