Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.19□□□□□ -0.14
Col6a2Q02788 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.19□□□□□ -0.14
Col6a2Q02788 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.19□□□□□ -0.14
Col6a2Q02788 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.19□□□□□ -0.14
Col6a2Q02788 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Col6a2Q02788 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a2Q02788 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Col6a2Q02788 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Gm20445-201ENSMUST00000061905 565 ntBASIC14.18□□□□□ -0.14
Col6a2Q02788 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col6a2Q02788 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.18□□□□□ -0.14
Col6a2Q02788 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.18□□□□□ -0.14
Col6a2Q02788 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.18□□□□□ -0.14
Col6a2Q02788 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a2Q02788 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.17□□□□□ -0.14
Col6a2Q02788 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Gm15321-201ENSMUST00000121290 288 ntBASIC14.17□□□□□ -0.14
Col6a2Q02788 Gm9522-201ENSMUST00000182394 926 ntBASIC14.17□□□□□ -0.14
Col6a2Q02788 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a2Q02788 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Gm6218-201ENSMUST00000219812 628 ntBASIC14.17□□□□□ -0.14
Col6a2Q02788 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a2Q02788 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms