Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm26464-201ENSMUST00000157094 305 ntBASIC17.71■□□□□ 0.43
Smarcc1P97496 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcc1P97496 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.71■□□□□ 0.43
Smarcc1P97496 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.71■□□□□ 0.43
Smarcc1P97496 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.71■□□□□ 0.43
Smarcc1P97496 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc1P97496 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc1P97496 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc1P97496 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smarcc1P97496 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcc1P97496 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc1P97496 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcc1P97496 BC037039-201ENSMUST00000192003 2205 ntBASIC17.71■□□□□ 0.43
Smarcc1P97496 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcc1P97496 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcc1P97496 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcc1P97496 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Gm13385-201ENSMUST00000121089 220 ntBASIC17.7■□□□□ 0.42
Smarcc1P97496 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.7■□□□□ 0.42
Smarcc1P97496 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.7■□□□□ 0.42
Smarcc1P97496 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Gm9257-201ENSMUST00000221254 232 ntBASIC17.7■□□□□ 0.42
Smarcc1P97496 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc1P97496 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smarcc1P97496 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Smarcc1P97496 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.69■□□□□ 0.42
Smarcc1P97496 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.69■□□□□ 0.42
Smarcc1P97496 Gm38671-201ENSMUST00000200573 130 ntBASIC17.69■□□□□ 0.42
Smarcc1P97496 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.69■□□□□ 0.42
Smarcc1P97496 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarcc1P97496 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.69■□□□□ 0.42
Smarcc1P97496 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.69■□□□□ 0.42
Smarcc1P97496 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc1P97496 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smarcc1P97496 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.68■□□□□ 0.42
Smarcc1P97496 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.68■□□□□ 0.42
Smarcc1P97496 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm6983-201ENSMUST00000214912 628 ntBASIC17.68■□□□□ 0.42
Smarcc1P97496 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.68■□□□□ 0.42
Smarcc1P97496 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm10012-201ENSMUST00000078252 192 ntBASIC17.68■□□□□ 0.42
Smarcc1P97496 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarcc1P97496 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarcc1P97496 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.68■□□□□ 0.42
Smarcc1P97496 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms