Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm9726-201ENSMUST00000180321 678 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm4857-201ENSMUST00000192718 785 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm18307-201ENSMUST00000206864 949 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm15808-201ENSMUST00000119046 604 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm13461-201ENSMUST00000120980 662 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm29199-201ENSMUST00000187766 775 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm18054-201ENSMUST00000207539 555 ntBASIC13.1□□□□□ -0.31
Cacna1aP97445 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cacna1aP97445 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1aP97445 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.09□□□□□ -0.31
Cacna1aP97445 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Gm7584-201ENSMUST00000175829 940 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Gm28911-201ENSMUST00000188837 117 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 Gm17794-201ENSMUST00000220252 955 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
Cacna1aP97445 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Gm11524-201ENSMUST00000119349 807 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.09□□□□□ -0.31
Cacna1aP97445 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Gm10012-201ENSMUST00000078252 192 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.09□□□□□ -0.31
Cacna1aP97445 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.09□□□□□ -0.31
Cacna1aP97445 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cacna1aP97445 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cacna1aP97445 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cacna1aP97445 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cacna1aP97445 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cacna1aP97445 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cacna1aP97445 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.08□□□□□ -0.31
Cacna1aP97445 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.08□□□□□ -0.32
Cacna1aP97445 AU022133-201ENSMUST00000200601 873 ntBASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm5425-201ENSMUST00000214125 459 ntBASIC13.08□□□□□ -0.32
Cacna1aP97445 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.08□□□□□ -0.32
Cacna1aP97445 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms