Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nkx2-3P97334 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.76■□□□□ 0.43
Nkx2-3P97334 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm11814-201ENSMUST00000119515 929 ntBASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm12485-201ENSMUST00000119641 291 ntBASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.75■□□□□ 0.43
Nkx2-3P97334 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Gm17794-201ENSMUST00000220252 955 ntBASIC17.75■□□□□ 0.43
Nkx2-3P97334 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-3P97334 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-3P97334 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.73■□□□□ 0.43
Nkx2-3P97334 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Mir1938-201ENSMUST00000158746 100 ntBASIC17.73■□□□□ 0.43
Nkx2-3P97334 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.73■□□□□ 0.43
Nkx2-3P97334 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Gm6983-201ENSMUST00000214912 628 ntBASIC17.73■□□□□ 0.43
Nkx2-3P97334 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.73■□□□□ 0.43
Nkx2-3P97334 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-3P97334 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.72■□□□□ 0.43
Nkx2-3P97334 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.72■□□□□ 0.43
Nkx2-3P97334 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Gm13612-201ENSMUST00000119276 390 ntBASIC17.72■□□□□ 0.43
Nkx2-3P97334 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Gm37424-201ENSMUST00000191727 561 ntBASIC17.72■□□□□ 0.43
Nkx2-3P97334 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms