Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdh11P55288 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh11P55288 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh11P55288 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.98□□□□□ -0.33
Cdh11P55288 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdh11P55288 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cdh11P55288 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdh11P55288 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh11P55288 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdh11P55288 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.97□□□□□ -0.33
Cdh11P55288 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.97□□□□□ -0.33
Cdh11P55288 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdh11P55288 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdh11P55288 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.97□□□□□ -0.33
Cdh11P55288 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdh11P55288 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdh11P55288 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.97□□□□□ -0.33
Cdh11P55288 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdh11P55288 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.97□□□□□ -0.33
Cdh11P55288 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Cdh11P55288 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh11P55288 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdh11P55288 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh11P55288 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdh11P55288 Matn2-206ENSMUST00000228570 2798 ntBASIC12.97□□□□□ -0.33
Cdh11P55288 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh11P55288 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.96□□□□□ -0.33
Cdh11P55288 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdh11P55288 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cdh11P55288 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.96□□□□□ -0.33
Cdh11P55288 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdh11P55288 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdh11P55288 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Cdh11P55288 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh11P55288 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.96□□□□□ -0.33
Cdh11P55288 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cdh11P55288 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh11P55288 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms