Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.89■□□□□ 0.45
Msh6P54276 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.89■□□□□ 0.45
Msh6P54276 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Msh6P54276 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh6P54276 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.88■□□□□ 0.45
Msh6P54276 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.88■□□□□ 0.45
Msh6P54276 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Msh6P54276 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Msh6P54276 Gm11814-201ENSMUST00000119515 929 ntBASIC17.88■□□□□ 0.45
Msh6P54276 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.88■□□□□ 0.45
Msh6P54276 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.88■□□□□ 0.45
Msh6P54276 Gm27486-201ENSMUST00000184923 80 ntBASIC17.88■□□□□ 0.45
Msh6P54276 Gm42693-201ENSMUST00000196779 631 ntBASIC17.88■□□□□ 0.45
Msh6P54276 Gm7287-201ENSMUST00000205267 602 ntBASIC17.88■□□□□ 0.45
Msh6P54276 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Msh6P54276 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.88■□□□□ 0.45
Msh6P54276 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh6P54276 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.87■□□□□ 0.45
Msh6P54276 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.87■□□□□ 0.45
Msh6P54276 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Msh6P54276 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Msh6P54276 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Gm7561-201ENSMUST00000211203 886 ntBASIC17.87■□□□□ 0.45
Msh6P54276 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Gm10478-201ENSMUST00000084451 396 ntBASIC17.87■□□□□ 0.45
Msh6P54276 Mir497b-201ENSMUST00000093601 125 ntBASIC17.87■□□□□ 0.45
Msh6P54276 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Msh6P54276 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh6P54276 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Msh6P54276 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Msh6P54276 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Msh6P54276 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Gm19078-201ENSMUST00000206311 727 ntBASIC17.86■□□□□ 0.45
Msh6P54276 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms