Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atxn1P54254 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atxn1P54254 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atxn1P54254 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atxn1P54254 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atxn1P54254 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atxn1P54254 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atxn1P54254 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
Atxn1P54254 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.1□□□□□ -0.15
Atxn1P54254 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Atxn1P54254 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Gm6222-201ENSMUST00000120787 396 ntBASIC14.1□□□□□ -0.15
Atxn1P54254 Mir3547-201ENSMUST00000175461 88 ntBASIC14.1□□□□□ -0.15
Atxn1P54254 Gm27631-201ENSMUST00000184163 466 ntBASIC14.1□□□□□ -0.15
Atxn1P54254 Gm27839-201ENSMUST00000184242 106 ntBASIC14.1□□□□□ -0.15
Atxn1P54254 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.1□□□□□ -0.15
Atxn1P54254 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atxn1P54254 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atxn1P54254 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atxn1P54254 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atxn1P54254 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atxn1P54254 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.09□□□□□ -0.15
Atxn1P54254 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.09□□□□□ -0.15
Atxn1P54254 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm29310-201ENSMUST00000185468 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21825-201ENSMUST00000185728 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm29109-201ENSMUST00000185895 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21896-201ENSMUST00000186520 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21873-201ENSMUST00000186728 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21794-201ENSMUST00000187056 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21880-201ENSMUST00000187275 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21826-201ENSMUST00000187451 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21198-201ENSMUST00000188393 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21749-201ENSMUST00000189343 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21901-201ENSMUST00000189568 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm29424-201ENSMUST00000189716 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm28599-201ENSMUST00000189838 694 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21867-201ENSMUST00000189917 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm29269-201ENSMUST00000190087 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21722-201ENSMUST00000190153 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm28423-201ENSMUST00000190701 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21899-201ENSMUST00000190745 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21910-201ENSMUST00000191163 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21849-201ENSMUST00000191571 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm28678-201ENSMUST00000191593 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm20910-201ENSMUST00000193268 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Gm21871-201ENSMUST00000194621 696 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atxn1P54254 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Atxn1P54254 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atxn1P54254 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms