Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Sox3P53784 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sox3P53784 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Sox3P53784 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox3P53784 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sox3P53784 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox3P53784 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox3P53784 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox3P53784 Gm29667-201ENSMUST00000190817 490 ntBASIC13.64□□□□□ -0.23
Sox3P53784 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox3P53784 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox3P53784 Gm9908-201ENSMUST00000211534 448 ntBASIC13.64□□□□□ -0.23
Sox3P53784 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox3P53784 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox3P53784 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox3P53784 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.63□□□□□ -0.23
Sox3P53784 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.63□□□□□ -0.23
Sox3P53784 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.63□□□□□ -0.23
Sox3P53784 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.63□□□□□ -0.23
Sox3P53784 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox3P53784 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.63□□□□□ -0.23
Sox3P53784 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sox3P53784 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox3P53784 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Sox3P53784 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sox3P53784 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Sox3P53784 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sox3P53784 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Sox3P53784 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Gm15824-201ENSMUST00000119516 955 ntBASIC13.62□□□□□ -0.23
Sox3P53784 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox3P53784 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms