Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Gm24589-201ENSMUST00000116692 94 ntBASIC11.79□□□□□ -0.52
Nkx2-1P50220 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.79□□□□□ -0.52
Nkx2-1P50220 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.79□□□□□ -0.52
Nkx2-1P50220 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-1P50220 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm7153-201ENSMUST00000117092 455 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm37153-201ENSMUST00000193637 231 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.78□□□□□ -0.52
Nkx2-1P50220 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-1P50220 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nkx2-1P50220 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.77□□□□□ -0.52
Nkx2-1P50220 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms