Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox18P43680 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Sox18P43680 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sox18P43680 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox18P43680 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Sox18P43680 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox18P43680 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.64□□□□□ -0.23
Sox18P43680 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.64□□□□□ -0.23
Sox18P43680 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox18P43680 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox18P43680 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox18P43680 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox18P43680 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.64□□□□□ -0.23
Sox18P43680 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.64□□□□□ -0.23
Sox18P43680 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox18P43680 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.64□□□□□ -0.23
Sox18P43680 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox18P43680 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox18P43680 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Sox18P43680 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.63□□□□□ -0.23
Sox18P43680 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Sox18P43680 Gm33320-201ENSMUST00000192232 530 ntBASIC13.63□□□□□ -0.23
Sox18P43680 Gm5279-201ENSMUST00000199575 745 ntBASIC13.63□□□□□ -0.23
Sox18P43680 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.63□□□□□ -0.23
Sox18P43680 Gm6916-202ENSMUST00000205523 195 ntBASIC13.63□□□□□ -0.23
Sox18P43680 Gm45574-201ENSMUST00000210921 331 ntBASIC13.63□□□□□ -0.23
Sox18P43680 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Sox18P43680 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox18P43680 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox18P43680 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox18P43680 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox18P43680 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox18P43680 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sox18P43680 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Sox18P43680 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox18P43680 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox18P43680 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.62□□□□□ -0.23
Sox18P43680 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.62□□□□□ -0.23
Sox18P43680 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms