Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf4P43488 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.73□□□□□ -0.21
Tnfsf4P43488 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Gm27920-201ENSMUST00000183953 96 ntBASIC13.73□□□□□ -0.21
Tnfsf4P43488 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Matn2-206ENSMUST00000228570 2798 ntBASIC13.73□□□□□ -0.21
Tnfsf4P43488 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.73□□□□□ -0.21
Tnfsf4P43488 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf4P43488 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.72□□□□□ -0.21
Tnfsf4P43488 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Acot6-202ENSMUST00000222921 3622 ntBASIC13.72□□□□□ -0.21
Tnfsf4P43488 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Psmb5-202ENSMUST00000227257 622 ntBASIC13.72□□□□□ -0.21
Tnfsf4P43488 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf4P43488 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.71□□□□□ -0.21
Tnfsf4P43488 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.71□□□□□ -0.21
Tnfsf4P43488 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.71□□□□□ -0.21
Tnfsf4P43488 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf4P43488 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfsf4P43488 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Tnfsf4P43488 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfsf4P43488 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms