Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist1h1aP43275 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gm8749-201ENSMUST00000117737 331 ntBASIC11.75□□□□□ -0.53
Hist1h1aP43275 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.75□□□□□ -0.53
Hist1h1aP43275 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gm10819-201ENSMUST00000099988 561 ntBASIC11.75□□□□□ -0.53
Hist1h1aP43275 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.75□□□□□ -0.53
Hist1h1aP43275 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Hist1h1aP43275 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist1h1aP43275 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.74□□□□□ -0.53
Hist1h1aP43275 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.74□□□□□ -0.53
Hist1h1aP43275 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gm15590-201ENSMUST00000078419 552 ntBASIC11.74□□□□□ -0.53
Hist1h1aP43275 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.74□□□□□ -0.53
Hist1h1aP43275 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h1aP43275 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms