Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chd1P40201 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chd1P40201 Gm43423-201ENSMUST00000198390 2094 ntBASIC20.97■□□□□ 0.95
Chd1P40201 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC20.97■□□□□ 0.95
Chd1P40201 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chd1P40201 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.97■□□□□ 0.95
Chd1P40201 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.97■□□□□ 0.95
Chd1P40201 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
Chd1P40201 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC20.97■□□□□ 0.95
Chd1P40201 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Gm15276-201ENSMUST00000145953 498 ntBASIC20.97■□□□□ 0.95
Chd1P40201 Gm27023-201ENSMUST00000182372 285 ntBASIC20.97■□□□□ 0.95
Chd1P40201 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC20.97■□□□□ 0.95
Chd1P40201 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC20.97■□□□□ 0.95
Chd1P40201 Gm10782-202ENSMUST00000223775 1480 ntBASIC20.97■□□□□ 0.95
Chd1P40201 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chd1P40201 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd1P40201 Prob1-201ENSMUST00000097619 3021 ntBASIC20.97■□□□□ 0.95
Chd1P40201 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.96■□□□□ 0.95
Chd1P40201 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC20.96■□□□□ 0.95
Chd1P40201 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC20.96■□□□□ 0.95
Chd1P40201 Gm43378-201ENSMUST00000199336 582 ntBASIC20.96■□□□□ 0.95
Chd1P40201 CT025533.2-201ENSMUST00000228715 1248 ntBASIC20.96■□□□□ 0.95
Chd1P40201 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Chd1P40201 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC20.96■□□□□ 0.95
Chd1P40201 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Gm45630-201ENSMUST00000210243 1911 ntBASIC20.96■□□□□ 0.95
Chd1P40201 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd1P40201 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 AC131690.1-201ENSMUST00000218406 374 ntBASIC20.95■□□□□ 0.94
Chd1P40201 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Chd1P40201 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC20.95■□□□□ 0.94
Chd1P40201 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Chd1P40201 Carlr-201ENSMUST00000181515 2574 ntBASIC20.95■□□□□ 0.94
Chd1P40201 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chd1P40201 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC20.95■□□□□ 0.94
Chd1P40201 Selenot-ps-201ENSMUST00000119098 593 ntBASIC20.95■□□□□ 0.94
Chd1P40201 n-R5s14-201ENSMUST00000122688 107 ntBASIC20.95■□□□□ 0.94
Chd1P40201 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chd1P40201 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Chd1P40201 Gm4768-201ENSMUST00000206199 686 ntBASIC20.95■□□□□ 0.94
Chd1P40201 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chd1P40201 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Gm5846-201ENSMUST00000193146 1414 ntBASIC20.94■□□□□ 0.94
Chd1P40201 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Gm4760-201ENSMUST00000119663 1030 ntBASIC20.94■□□□□ 0.94
Chd1P40201 Gm28693-202ENSMUST00000190758 331 ntBASIC20.94■□□□□ 0.94
Chd1P40201 Gm38144-201ENSMUST00000192790 465 ntBASIC20.94■□□□□ 0.94
Chd1P40201 Gm43830-201ENSMUST00000198760 1067 ntBASIC20.94■□□□□ 0.94
Chd1P40201 Gm20632-201ENSMUST00000176760 2427 ntBASIC20.94■□□□□ 0.94
Chd1P40201 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Chd1P40201 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC20.94■□□□□ 0.94
Chd1P40201 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chd1P40201 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 Gm2231-201ENSMUST00000125661 612 ntBASIC20.93■□□□□ 0.94
Chd1P40201 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chd1P40201 Gm31256-201ENSMUST00000194705 506 ntBASIC20.93■□□□□ 0.94
Chd1P40201 Gm9678-201ENSMUST00000198979 1149 ntBASIC20.93■□□□□ 0.94
Chd1P40201 Gm42997-202ENSMUST00000200321 985 ntBASIC20.93■□□□□ 0.94
Chd1P40201 Gm44967-201ENSMUST00000207047 631 ntBASIC20.93■□□□□ 0.94
Chd1P40201 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Chd1P40201 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd1P40201 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chd1P40201 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms