Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Gm24543-201ENSMUST00000103867 82 ntBASIC13.16□□□□□ -0.3
Foxa1P35582 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.16□□□□□ -0.3
Foxa1P35582 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.16□□□□□ -0.3
Foxa1P35582 Dupd1-202ENSMUST00000224735 548 ntBASIC13.16□□□□□ -0.3
Foxa1P35582 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Foxa1P35582 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Foxa1P35582 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxa1P35582 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.15□□□□□ -0.3
Foxa1P35582 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Foxa1P35582 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Foxa1P35582 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.15□□□□□ -0.3
Foxa1P35582 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Foxa1P35582 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.15□□□□□ -0.3
Foxa1P35582 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.15□□□□□ -0.3
Foxa1P35582 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.15□□□□□ -0.3
Foxa1P35582 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxa1P35582 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.14□□□□□ -0.31
Foxa1P35582 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Gm15957-201ENSMUST00000118893 974 ntBASIC13.14□□□□□ -0.31
Foxa1P35582 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Gm27618-201ENSMUST00000183671 60 ntBASIC13.14□□□□□ -0.31
Foxa1P35582 Gm38294-201ENSMUST00000192831 381 ntBASIC13.14□□□□□ -0.31
Foxa1P35582 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.14□□□□□ -0.31
Foxa1P35582 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.14□□□□□ -0.31
Foxa1P35582 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Foxa1P35582 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Foxa1P35582 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Foxa1P35582 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxa1P35582 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Foxa1P35582 Mir1897-201ENSMUST00000122581 272 ntBASIC13.13□□□□□ -0.31
Foxa1P35582 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms