Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.54□□□□□ -0.4
Cd28P31041 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.54□□□□□ -0.4
Cd28P31041 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Gm14859-201ENSMUST00000117752 357 ntBASIC12.54□□□□□ -0.4
Cd28P31041 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.54□□□□□ -0.4
Cd28P31041 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.54□□□□□ -0.4
Cd28P31041 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Olfr286-202ENSMUST00000205305 969 ntBASIC12.54□□□□□ -0.4
Cd28P31041 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.54□□□□□ -0.4
Cd28P31041 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.54□□□□□ -0.4
Cd28P31041 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.54□□□□□ -0.4
Cd28P31041 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.54□□□□□ -0.4
Cd28P31041 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd28P31041 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd28P31041 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cd28P31041 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.53□□□□□ -0.4
Cd28P31041 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.53□□□□□ -0.4
Cd28P31041 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.53□□□□□ -0.4
Cd28P31041 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gm25990-201ENSMUST00000102440 86 ntBASIC12.53□□□□□ -0.4
Cd28P31041 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.53□□□□□ -0.4
Cd28P31041 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cd28P31041 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Cd28P31041 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.53□□□□□ -0.4
Cd28P31041 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Cd28P31041 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.53□□□□□ -0.4
Cd28P31041 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.53□□□□□ -0.4
Cd28P31041 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.53□□□□□ -0.4
Cd28P31041 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms