Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.13□□□□□ -0.31
Nedd8P29595 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.13□□□□□ -0.31
Nedd8P29595 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Nedd8P29595 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Gm44454-201ENSMUST00000198541 138 ntBASIC13.13□□□□□ -0.31
Nedd8P29595 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nedd8P29595 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Nedd8P29595 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nedd8P29595 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nedd8P29595 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nedd8P29595 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.12□□□□□ -0.31
Nedd8P29595 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.12□□□□□ -0.31
Nedd8P29595 Gm25745-201ENSMUST00000174945 133 ntBASIC13.12□□□□□ -0.31
Nedd8P29595 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nedd8P29595 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nedd8P29595 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nedd8P29595 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Nedd8P29595 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nedd8P29595 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.11□□□□□ -0.31
Nedd8P29595 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Nedd8P29595 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nedd8P29595 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.11□□□□□ -0.31
Nedd8P29595 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.11□□□□□ -0.31
Nedd8P29595 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.11□□□□□ -0.31
Nedd8P29595 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nedd8P29595 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nedd8P29595 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Nedd8P29595 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Nedd8P29595 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.11□□□□□ -0.31
Nedd8P29595 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.11□□□□□ -0.31
Nedd8P29595 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nedd8P29595 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.11□□□□□ -0.31
Nedd8P29595 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms