Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RxrbP28704 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Gm13036-201ENSMUST00000117799 748 ntBASIC14.28□□□□□ -0.12
RxrbP28704 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.28□□□□□ -0.12
RxrbP28704 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RxrbP28704 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.28□□□□□ -0.12
RxrbP28704 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.28□□□□□ -0.12
RxrbP28704 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.28□□□□□ -0.12
RxrbP28704 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RxrbP28704 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.28□□□□□ -0.12
RxrbP28704 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RxrbP28704 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.28□□□□□ -0.12
RxrbP28704 Gm18195-201ENSMUST00000207604 706 ntBASIC14.28□□□□□ -0.12
RxrbP28704 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.28□□□□□ -0.12
RxrbP28704 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.28□□□□□ -0.12
RxrbP28704 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RxrbP28704 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RxrbP28704 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RxrbP28704 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.27□□□□□ -0.12
RxrbP28704 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.27□□□□□ -0.12
RxrbP28704 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RxrbP28704 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RxrbP28704 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RxrbP28704 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RxrbP28704 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.27□□□□□ -0.13
RxrbP28704 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RxrbP28704 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Gm37230-201ENSMUST00000194491 818 ntBASIC14.27□□□□□ -0.13
RxrbP28704 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.27□□□□□ -0.13
RxrbP28704 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RxrbP28704 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RxrbP28704 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RxrbP28704 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.26□□□□□ -0.13
RxrbP28704 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RxrbP28704 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Acot6-202ENSMUST00000222921 3622 ntBASIC14.26□□□□□ -0.13
RxrbP28704 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RxrbP28704 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.26□□□□□ -0.13
RxrbP28704 Gm11452-201ENSMUST00000122376 690 ntBASIC14.26□□□□□ -0.13
RxrbP28704 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
RxrbP28704 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.26□□□□□ -0.13
RxrbP28704 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.26□□□□□ -0.13
RxrbP28704 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.26□□□□□ -0.13
RxrbP28704 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RxrbP28704 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms