Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nckap1P28660 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Gm22189-201ENSMUST00000103822 86 ntBASIC14.15□□□□□ -0.14
Nckap1P28660 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.15□□□□□ -0.14
Nckap1P28660 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nckap1P28660 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.15□□□□□ -0.14
Nckap1P28660 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nckap1P28660 Gm18018-201ENSMUST00000198273 408 ntBASIC14.15□□□□□ -0.14
Nckap1P28660 Gm6745-201ENSMUST00000199216 526 ntBASIC14.15□□□□□ -0.14
Nckap1P28660 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.15□□□□□ -0.14
Nckap1P28660 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.15□□□□□ -0.14
Nckap1P28660 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.15□□□□□ -0.14
Nckap1P28660 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.15□□□□□ -0.14
Nckap1P28660 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nckap1P28660 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nckap1P28660 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nckap1P28660 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nckap1P28660 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Nckap1P28660 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nckap1P28660 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Gm23984-201ENSMUST00000157139 203 ntBASIC14.14□□□□□ -0.15
Nckap1P28660 Gm21854-201ENSMUST00000179901 471 ntBASIC14.14□□□□□ -0.15
Nckap1P28660 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.14□□□□□ -0.15
Nckap1P28660 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.14□□□□□ -0.15
Nckap1P28660 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Gm15823-201ENSMUST00000064305 670 ntBASIC14.14□□□□□ -0.15
Nckap1P28660 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nckap1P28660 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Nckap1P28660 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nckap1P28660 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nckap1P28660 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nckap1P28660 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.13□□□□□ -0.15
Nckap1P28660 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.13□□□□□ -0.15
Nckap1P28660 Gm15957-201ENSMUST00000118893 974 ntBASIC14.13□□□□□ -0.15
Nckap1P28660 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.13□□□□□ -0.15
Nckap1P28660 Gm12091-201ENSMUST00000146791 830 ntBASIC14.13□□□□□ -0.15
Nckap1P28660 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.13□□□□□ -0.15
Nckap1P28660 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Gm10766-202ENSMUST00000194123 606 ntBASIC14.13□□□□□ -0.15
Nckap1P28660 Gm37917-201ENSMUST00000194711 392 ntBASIC14.13□□□□□ -0.15
Nckap1P28660 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nckap1P28660 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.13□□□□□ -0.15
Nckap1P28660 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.13□□□□□ -0.15
Nckap1P28660 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.13□□□□□ -0.15
Nckap1P28660 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nckap1P28660 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Nckap1P28660 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nckap1P28660 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nckap1P28660 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nckap1P28660 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms