Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.93■□□□□ 0.14
Col2a1P28481 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.93■□□□□ 0.14
Col2a1P28481 Gm6152-201ENSMUST00000151704 340 ntBASIC15.93■□□□□ 0.14
Col2a1P28481 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Gm7561-201ENSMUST00000211203 886 ntBASIC15.93■□□□□ 0.14
Col2a1P28481 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.93■□□□□ 0.14
Col2a1P28481 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.93■□□□□ 0.14
Col2a1P28481 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col2a1P28481 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
Col2a1P28481 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.92■□□□□ 0.14
Col2a1P28481 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.92■□□□□ 0.14
Col2a1P28481 Gm29127-201ENSMUST00000188304 517 ntBASIC15.92■□□□□ 0.14
Col2a1P28481 Gm29608-201ENSMUST00000190444 463 ntBASIC15.92■□□□□ 0.14
Col2a1P28481 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col2a1P28481 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col2a1P28481 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
Col2a1P28481 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col2a1P28481 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.92■□□□□ 0.14
Col2a1P28481 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col2a1P28481 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm11803-201ENSMUST00000119966 444 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm12403-201ENSMUST00000121384 959 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Col2a1P28481 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.91■□□□□ 0.14
Col2a1P28481 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col2a1P28481 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.91■□□□□ 0.14
Col2a1P28481 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Col2a1P28481 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col2a1P28481 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.91■□□□□ 0.14
Col2a1P28481 Snora78-201ENSMUST00000158630 128 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.91■□□□□ 0.14
Col2a1P28481 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.91■□□□□ 0.14
Col2a1P28481 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col2a1P28481 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col2a1P28481 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col2a1P28481 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col2a1P28481 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col2a1P28481 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col2a1P28481 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col2a1P28481 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col2a1P28481 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Col2a1P28481 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col2a1P28481 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms