Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccl6P27784 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Ccl6P27784 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Ccl6P27784 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Ccl6P27784 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Gm37230-201ENSMUST00000194491 818 ntBASIC11.11□□□□□ -0.63
Ccl6P27784 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.11□□□□□ -0.63
Ccl6P27784 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.11□□□□□ -0.63
Ccl6P27784 Gm9182-201ENSMUST00000217829 639 ntBASIC11.11□□□□□ -0.63
Ccl6P27784 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.11□□□□□ -0.63
Ccl6P27784 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl6P27784 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Ccl6P27784 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccl6P27784 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
Ccl6P27784 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccl6P27784 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.1□□□□□ -0.63
Ccl6P27784 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccl6P27784 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Ccl6P27784 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccl6P27784 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl6P27784 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl6P27784 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.1□□□□□ -0.63
Ccl6P27784 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.09□□□□□ -0.63
Ccl6P27784 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccl6P27784 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.09□□□□□ -0.63
Ccl6P27784 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Ccl6P27784 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms