Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cbx3P23198 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.96□□□□□ -0.33
Cbx3P23198 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.96□□□□□ -0.33
Cbx3P23198 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.96□□□□□ -0.33
Cbx3P23198 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.96□□□□□ -0.33
Cbx3P23198 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Cbx3P23198 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cbx3P23198 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cbx3P23198 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.96□□□□□ -0.34
Cbx3P23198 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.96□□□□□ -0.34
Cbx3P23198 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cbx3P23198 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cbx3P23198 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Gm11950-201ENSMUST00000121615 838 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cbx3P23198 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.95□□□□□ -0.34
Cbx3P23198 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cbx3P23198 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cbx3P23198 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cbx3P23198 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.94□□□□□ -0.34
Cbx3P23198 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.94□□□□□ -0.34
Cbx3P23198 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cbx3P23198 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cbx3P23198 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Cbx3P23198 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cbx3P23198 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms