Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cntn1P12960 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.65□□□□□ -0.22
Cntn1P12960 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.65□□□□□ -0.22
Cntn1P12960 Gm4875-201ENSMUST00000118257 786 ntBASIC13.65□□□□□ -0.22
Cntn1P12960 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.65□□□□□ -0.22
Cntn1P12960 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.65□□□□□ -0.22
Cntn1P12960 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Gm2423-201ENSMUST00000074863 733 ntBASIC13.65□□□□□ -0.22
Cntn1P12960 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.65□□□□□ -0.22
Cntn1P12960 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cntn1P12960 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cntn1P12960 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cntn1P12960 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.23
Cntn1P12960 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cntn1P12960 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.64□□□□□ -0.23
Cntn1P12960 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Gm5866-201ENSMUST00000177881 973 ntBASIC13.64□□□□□ -0.23
Cntn1P12960 Gm27838-201ENSMUST00000184829 128 ntBASIC13.64□□□□□ -0.23
Cntn1P12960 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Gm9229-201ENSMUST00000222777 126 ntBASIC13.64□□□□□ -0.23
Cntn1P12960 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.64□□□□□ -0.23
Cntn1P12960 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cntn1P12960 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cntn1P12960 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cntn1P12960 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.64□□□□□ -0.23
Cntn1P12960 Syt7-204ENSMUST00000223586 1344 ntBASIC13.64□□□□□ -0.23
Cntn1P12960 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.63□□□□□ -0.23
Cntn1P12960 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Gm16215-201ENSMUST00000161990 637 ntBASIC13.63□□□□□ -0.23
Cntn1P12960 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 Gm3436-201ENSMUST00000179930 840 ntBASIC13.63□□□□□ -0.23
Cntn1P12960 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.63□□□□□ -0.23
Cntn1P12960 Gm6916-202ENSMUST00000205523 195 ntBASIC13.63□□□□□ -0.23
Cntn1P12960 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.63□□□□□ -0.23
Cntn1P12960 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cntn1P12960 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cntn1P12960 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Cntn1P12960 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cntn1P12960 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.62□□□□□ -0.23
Cntn1P12960 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
Cntn1P12960 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.62□□□□□ -0.23
Cntn1P12960 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.62□□□□□ -0.23
Cntn1P12960 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms