Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fv4P11370 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fv4P11370 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fv4P11370 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Fv4P11370 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fv4P11370 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Fv4P11370 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.74□□□□□ -0.21
Fv4P11370 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.74□□□□□ -0.21
Fv4P11370 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.74□□□□□ -0.21
Fv4P11370 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.74□□□□□ -0.21
Fv4P11370 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.74□□□□□ -0.21
Fv4P11370 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Fv4P11370 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.74□□□□□ -0.21
Fv4P11370 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.74□□□□□ -0.21
Fv4P11370 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.74□□□□□ -0.21
Fv4P11370 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.74□□□□□ -0.21
Fv4P11370 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.74□□□□□ -0.21
Fv4P11370 Gm18057-201ENSMUST00000208220 503 ntBASIC13.74□□□□□ -0.21
Fv4P11370 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.74□□□□□ -0.21
Fv4P11370 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Fv4P11370 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Fv4P11370 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.74□□□□□ -0.21
Fv4P11370 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Fv4P11370 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fv4P11370 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Fv4P11370 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Fv4P11370 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.73□□□□□ -0.21
Fv4P11370 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Fv4P11370 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.73□□□□□ -0.21
Fv4P11370 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.73□□□□□ -0.21
Fv4P11370 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Gm18206-201ENSMUST00000207027 926 ntBASIC13.73□□□□□ -0.21
Fv4P11370 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Fv4P11370 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Fv4P11370 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.73□□□□□ -0.21
Fv4P11370 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fv4P11370 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Gm11779-201ENSMUST00000118541 368 ntBASIC13.72□□□□□ -0.21
Fv4P11370 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.72□□□□□ -0.21
Fv4P11370 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fv4P11370 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.72□□□□□ -0.21
Fv4P11370 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Fv4P11370 Gm10175-201ENSMUST00000086013 645 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms