Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hoxc6P10629 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hoxc6P10629 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.71■□□□□ 0.1
Hoxc6P10629 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hoxc6P10629 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm26464-201ENSMUST00000157094 305 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm27847-201ENSMUST00000183711 107 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm27375-201ENSMUST00000183799 107 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm29127-201ENSMUST00000188304 517 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 Gm6091-201ENSMUST00000098307 165 ntBASIC15.7■□□□□ 0.1
Hoxc6P10629 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hoxc6P10629 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc6P10629 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.69■□□□□ 0.1
Hoxc6P10629 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm13385-201ENSMUST00000121089 220 ntBASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm15376-201ENSMUST00000122258 783 ntBASIC15.69■□□□□ 0.1
Hoxc6P10629 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm27731-201ENSMUST00000185192 107 ntBASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Gm10012-201ENSMUST00000078252 192 ntBASIC15.69■□□□□ 0.1
Hoxc6P10629 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.69■□□□□ 0.1
Hoxc6P10629 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hoxc6P10629 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc6P10629 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxc6P10629 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc6P10629 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc6P10629 Gm24420-201ENSMUST00000176676 59 ntBASIC15.68■□□□□ 0.1
Hoxc6P10629 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Hoxc6P10629 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hoxc6P10629 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
Hoxc6P10629 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.68■□□□□ 0.1
Hoxc6P10629 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc6P10629 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc6P10629 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms