Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.3■□□□□ 0.52
Hoxc9P09633 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.3■□□□□ 0.52
Hoxc9P09633 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxc9P09633 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.3■□□□□ 0.52
Hoxc9P09633 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.3■□□□□ 0.52
Hoxc9P09633 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.3■□□□□ 0.52
Hoxc9P09633 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Hoxc9P09633 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.3■□□□□ 0.52
Hoxc9P09633 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxc9P09633 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.3■□□□□ 0.52
Hoxc9P09633 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hoxc9P09633 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm13392-201ENSMUST00000117708 150 ntBASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm24196-201ENSMUST00000179161 110 ntBASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm27847-201ENSMUST00000183711 107 ntBASIC18.29■□□□□ 0.52
Hoxc9P09633 Gm27375-201ENSMUST00000183799 107 ntBASIC18.29■□□□□ 0.52
Hoxc9P09633 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hoxc9P09633 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxc9P09633 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hoxc9P09633 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Sybu-209ENSMUST00000228639 4113 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm13612-201ENSMUST00000119276 390 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Snora78-201ENSMUST00000158630 128 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm29741-201ENSMUST00000192667 421 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm44397-201ENSMUST00000195950 113 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.28■□□□□ 0.52
Hoxc9P09633 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.28■□□□□ 0.52
Hoxc9P09633 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.28■□□□□ 0.52
Hoxc9P09633 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxc9P09633 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.27■□□□□ 0.52
Hoxc9P09633 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
Hoxc9P09633 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms